YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADA2B_ELEMA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AIAAVITFLI LFTIFGNALV ILAVLTSRSL RAPQNLFLVS LAAADILVAT LIIPFSLANE  60
   61 LLGYWYFRRT WCEVYLALDV LFCTSSIVHL CAISLDRYWA VSRALQYNSK RTPRRIKCVI 120
  121 LTVWLIAAAI SLPPLIYKGD QGPQPRGRPQ CKLNQEAWYI LSSSIGSFFA PCLIMILVYL 180
  181 RIYLIAKRSN RRGPRAKGAP REGEPKQPHP LPAGPSALAN SPTLASSLAV TGEANGHSEP 240
  241 PGEKERETPE DPGTLTLPPS WPVLPNSGQG QKEGVCGASP EEEEECGSPA VPASPALACS 300
  301 PPLQQPKGSR VLATLRGQVL LGRGVGTAGG QWWRRRAQLT REKRFTFVLA VVIGVFVLCW 360
  361 FPFFFSYSLG AICPQHCKVP HGLF

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.88
Transmembrane Helix	6	26	0.95
Cytoplasmic	27	35	0.86
Transmembrane Helix	36	58	0.92
Non-Cytoplasmic	59	74	0.93
Transmembrane Helix	75	95	0.93
Cytoplasmic	96	115	0.88
Transmembrane Helix	116	137	0.91
Non-Cytoplasmic	138	163	0.91
Transmembrane Helix	164	185	0.91
Cytoplasmic	186	344	0.99
Transmembrane Helix	345	364	0.98
Non-Cytoplasmic	365	384	0.92