YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	21KD_DAUCA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSKSTLVF SALLVILAAA SAAPANQFIK TSCTLTTYPA VCEQSLSAYA KTIQNNPQEL  60
   61 ASTALQVSLT RTQQAQTFMK RLNKFKGLKA RQYAAIHDCL EEVEDSLDRV SRSCDEMKNL 120
  121 SHAKGNDFTF RMSNVETWVS AALTDETTCM DGFAGKGMDG KIKESVRAQV VAVARVTSNA 180
  181 LALVNNFAAK HKH

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	193	0.99