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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-52
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSSTVLAA LLALLLVATN DAARHRKYRQ TYQDIDSDDD DTSDVQITVF PSEKEVRDGR  60
   61 DVSFECRART SDNSVYPTVR WARVGGPLPS SAHDSGGRLT INPVQLSDAG TYICVSDYNG 120
  121 NTVEARATLS VVSYGPQEVS NGLRQAGQCM ADEKACGNNE CVKNDYVCDG EPDCRDRSDE 180
  181 ANCPAISRTC EPNEFKCNNN KCVQKMWLCD GDDDCGDNSD ELNCNAKPSS SDCKPTEFQC 240
  241 HDRRQCVPSS FHCDGTNDCH DGSDEVGCVQ PTVVDPPQTN LQVPRGTTFS LTCKAVAVPE 300
  301 PYINWRLNWG PVCEPPRCLQ TSEGGYGTLT IHDAQPVDQG AYTCEAINVK GRVLATPDCI 360
  361 VRVVDDPRPQ PPQPPTAPPQ RASCDTRGAV TPYPNNYGTC ECKSQVTGPN CDQCKPGAFH 420
  421 LSEKSPEGCL KCFCFGVSND CRSSGHYRTK DRLMFAGDAE GVTISDIEER TIDRNTPFSF 480
  481 FKTGYLTFDG TTDGVAKYWR LPQRFLGDKV TAYGGKMEFE IEFSGSGHHS SEPMVVLKGN 540
  541 QNILVHRVRN QEHVLRSDSP VRITVETYET NYEQLNGAAA TREDLLMVLA DLDAFLIRAT 600
  601 HVAHQTSTSL GDVSWEIAVD RYTPDGLALE VEQCVCPPGY LGTSCEDCAP GYERSGYGPY 660
  661 LGTCVPIQPR HQQCGPGAVA PTAPAQGQCQ CKASVIGPNC DRCAPNSFGL APTNPQGCIP 720
  721 CFCSGVTQQC SASSYRRTSV SIDYARGDRD QLELTTSDSR QPYSPQTRAE LSGQAIEFRS 780
  781 FEEARGQTLY WKLPEKFLGD KVTSYGGTLE YTFKFSGNGN SDQSADVILR GNDIALQYKH 840
  841 REPFYADREN KVQIKIIETS WQRVDGQQAT REHLLMTLAD LDTLLIKSTY NDDCTDSQLL 900
  901 SANLEFAEPY GQGLTAAEVE QCICPPGYVG TSCEDCAPGY SRTGGGLYLG LCEKCECNGH 960
  961 ASQCDKEYGY CLDCQHNTEG DQCERCKPGF VGDARRGTPN DCQPEATRAP CHCNNHSPRG1020
 1021 CDSFGRCLLC EHNTEGTHCE RCKKGYYGDA TKGSPYDCTP CPCPGASDCY LDNEGQVACR1080
 1081 ICPAGLQGRL CNECAPGYTR SNKPAGRVCE PIGQVTNEDI TFVQKPHEGG RPPQPVIDPP1140
 1141 HLVVNEGEPA AFRCWVPGIP DCQITWHREQ LGGPLPHGVY QTGNALKIPQ SQLHHAGRYI1200
 1201 CSAANQYGTG QSPPAVLEVK KPVIPPKVDP IRQTVDRDQP ARFKCWVPGN SNVQLRWSRP1260
 1261 GGAPLPSGVQ EQQGILHIPR ASDQEVGQYV CTATDPSDNT PLQSEPVQLN IRDPAPPQRG1320
 1321 AAPQIDPPNQ TVNVNDPAQF RCWVPGQPRA QLKWSRKDGR PLPNGILERD GFLRIDKSQL1380
 1381 HDAGEYECTS TEPDGSTQLS PPARLNVNQP QAIQPQVDPP VQTVNEGEPS RIRCWVPGHP1440
 1441 NIQLQFVKRG RRPLPAHARF SQGNLEIPRT LKSDEDEYIC IATDPTTNRP VESNPARVIV1500
 1501 KSPIRPIIDP AEQTVPEGSP FKIRCYVPGH PSVQLTFRRV SGQLNEDADE NNGLLAVQRA1560
 1561 ELTDEGDYIC TARDPDTGAP IDSTPATVHV TNAAAPPQVE ARPPQHPVIT PQTQTIPEGD1620
 1621 PARIQCTVPG NPSAAQHLSF ERVDGKGLPF GSSDDRGVLT IPSTQLQDAG EYVCLYSPEN1680
 1681 SPPVKTNPST LNVTPEGTPP RPVATPPLLS VAPGSPARFN CVAHSDTPAR IRWGFREENG1740
 1741 PLPEHVNQDG DDIVISEAGD RNVGEYVCSA TNDFGTGVAD PVRLEVTEDQ EPPTAVVEPR1800
 1801 TWNGKPGERH QFRCITTGSP TPKITWTGPN GSPLPHDVTP LEPNILDFSN GRSELNGDYT1860
 1861 CTASNPIGEA SDHGNVNIGP SLTVKTNPPG PKLIVTVGEP LQVKCEAFGA PGDPEPEVEW1920
 1921 LHDPGPERGD LPDDFKPVTI SEQFIRHPNV GLGNAGVYTC KGSSAHATAT KNIYIEVVEP1980
 1981 SRIATVSILG GSSQWFDQGE KGELICTATG SSLVDRLEWE KVDDQLPTDV EEHNEPGLLH2040
 2041 FPSFKNSYAG EYRCNGYRNN EIIASAAVHV HSSANADDEP KVEIEPPRVR VVSQGDNIVL2100
 2101 KCSVQGAENG EHFKWALLRG GSLVRQLGTE PTLEITKADP SNDFGVYRCN VEDNNGLVIG2160
 2161 SAFTAVSVGQ QDKSHAQIVK FDDKSDASFT CPIYSVPGSK VDWTYENGDL PSKAVPNGNK2220
 2221 IEIKEFDDAS AGTYVCKVSF DGNVVEGFVT AQMFVPDTII QVLLEVSSES PQIGDRAWFD2280
 2281 CKVTGDPSAV ISWTKEGNDD LPPNAQVTGG RLLFTDLKED NAGVYRCVAK TKAGPLQTRT2340
 2341 VLNVGSGKRK RKHLGNRRGR RLRHRRRNAQ NGPLSRKTRT TTKLFGSWF

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