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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE37303
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASDDEEDFT QLQINQNRKH KKAGGWQQIG LDHSVYKAIE KKGFNQPTPI QRKTIPCIMD  60
   61 GKDVVAMSRT GSGKTAAFVI PMLQKLKRRD TTGIRALMVS PTRELALQTF KVVKELGRFT 120
  121 GLRCACLVGG DQIEEQFSTI HENPDILLAT PGRLLHVIVE MDLRLSYVQY VVFDEADRLF 180
  181 EMGFQDQLTE TLKRIPESRQ TLLFSATLPK MLVDFAKAGL TDPMLVRLDV DEKVSDKLSM 240
  241 VFCMCRPDEK LFALLHLCRR MDRENKQTVV FCATMKHVEY VVGILHRAGI DCSFVYSQLD 300
  301 ATARKMNIQK FHEKQNNILV VTDVAARGVD IPLLDTVINL HFPPKAKLFV HRVGRVARAG 360
  361 RSGTAISLIA NDELPYLTDL FMFLGKPINF ASDKSEYKED ETLIGRVPDS IVSLETEFFH 420
  421 SIHDNNEDMQ DLRQKATNAM MKYTRTRPPP SAESARRVKQ DIRTDSVECA PHPFLKADGD 480
  481 KQSNDILNKI SQYKSRNTIF EMNKSQKSQA LAVMQAKRKA HEPRISTVTE EKRKQKEEKE 540
  541 QQQKSTDIAV EIAEKTVENA GEDELAEVFG TVIGSTKHTE KSEEKGGKKR KIGTGKRIDR 600
  601 AEQMKFEREK HYVPYMSSDH VAERHLALDT VDFARQAEGA SVDIIMDDDR GMYQQKHGQR 660
  661 WDRRLKKYVG LSGGNEPANK KIRTEDGTWL PASYKTGKYE DWKQKQKIGF KKSDGGGDDG 720
  721 DNEGSGGMDR KRKWKMEKPK GGPKHSELKN KEQILKLKFM KLIKDQNILS LRIRNRFLRV 780
  781 AVSKSNSKTT WSIAVSRISK RRPSILDEVE PAVLVEEPVE ELVAELVEEA PEGLAEEPGE 840
  841 AENSETGVDF LIFFFVIFWK FLLIFSLFVI R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle