YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36371
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKIAVLGAG INGIASALAI QERLPNCEVT IIAEKFSPNT TSDVAAGLIE PFLCDDDVDR  60
   61 IINWTSATIS RIHEYQADGN PGAEEQSGYW LQSVKSEPKW LKLMKNVHIL TDAEMKQVAR 120
  121 RPEHKFGIFY TTWYLEPTPY IKWCTDKFLK NGGKFKKQKI ENIDDVARSY DVTVNCTGLG 180
  181 SRALIGDKEV YPTRGQILKV SCPRVKHFFI DDKYYALLND STITLGGTFE AHQWDLTINS 240
  241 ELSQKILKEN IHNIPSLRTA QILSSHVDMR PSRGTVRLQA ELGRSLVHNY GHGGSGITLH 300
  301 WGCALECAEI VENVLKMKKS KL

Type	Start	End	Confidence
Signal Peptide	1	19	0.92
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	322	0.99