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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: plx-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTFLQFFII FGVAAAAAGS KNVYSIDDNL VFKNPSHDGH EVFEKMAIDP STTRVFVGAV  60
   61 NSLYDLTSAD LTVRRHVQTG PQDDSPLCRD ARNREECRHQ LSRTNSHTKA LSVYDKSSKL 120
  121 IECSNLYQGR CRLRNLHNIS EVISEAIEPR VSNDTSSSVV IFVGSGPANL SSEPVLYVGA 180
  181 TIGSGDHDRM SVSSLFLRPQ KAFEVVFPGL YGGTHVSLDY RSRGYYKYQI DYINGFESGD 240
  241 YAYFVTRQRV NIADDSSIQS RLVRVCTGDK NFHSYTEVPL ECTQNGVEFN LVQDVYVTRA 300
  301 GYELAKSLDI SVSDPVLYGV FWEGDKNSYR SQEPTGKSAI CMFTMREIET SFKQNIMKCY 360
  361 KGTSGLKKNL PWFSSNDDCR FTTLPWEGIK CGKDVNSKIG GDTPISTSAT YVMEDSSNLL 420
  421 TAIAINTTRS STVAFVGTQG GQLHKILIES KRSAEKYATE MLTDNEPILS DMEFGGDGKH 480
  481 VYILTPSKVI KMPTSRCEAL STQCDTCLSS RDPYCGWCVS NNHCTQEESC EREVPHTSRG 540
  541 WLDFQNSKCP RIRSVKPDQI QINTADYLNV TIENLQAPKG RRMQCLFQFS TGDAVVSDPM 600
  601 PFDGSLKCAT PPMNRLPRIP TNEYHLPAKL IVVSDGSKLP LATTNFSFYD CNRYTSCSTC 660
  661 SASQFPCDWC LESNECVAGK LTEDKCRKQH IVNGLNRDGS SIRKGPSKCP HIVAPVSKMS 720
  721 VATGERRNIS VKVENVDATF MGDFKCEFKY GTVTHEKIAM RTSDDTITCD EMLFEPYGTS 780
  781 LLGSGSTPYG FNVIWSATGF AVGKKSINRV LDNVASLAID VYSCENLATN CGRCLTLDAD 840
  841 KYDCGWCSLD SKCARPHQCS NRQIPENWLN ASQLCPNPVI EDFKPKKGSI FGGTRVTING 900
  901 INLGRHVSDV EKAVQIANVP CEVVEYVPSQ KIVCVTGKSP IKGSNERGVV AVTLRHDSLK 960
  961 FFAHSTEHFS YVQPVVSSMK PVKGPRSGGT DVTLTGVDLD TGAEVTVRFG QIGCKILERA1020
 1021 SGWLRCRMGA SGEGGQFPLH IAFDGQLQNL PIPIYFEFTS DPSVQSISPN KTIPSGGITV1080
 1081 DVYGQGFTLL QRPRMVFTGL GDEKSYGPAC SIEDDQMMKC ATPTAPGKDS DRGSQERITE1140
 1141 YAFDFDGAEL YRSRIKVMPS PTFETLSEPR FVRPGEDFLT LNGNHLNLAA SERDIDVKVG1200
 1201 GEPCPLTALA NKVLTCQPPV KKPRGAGKLN PEIVVTVGNA SFSIGEVSYD SPGLSSSLFF1260
 1261 IIMFFIIFMI ALIICLIVLY RRKSNTHQRQ MKYLKTQMDT IEMKVATECK EAFAELQTSL1320
 1321 NQYTADLPLG TPTAPFLEYK DYCARVLFPN AGKNHAVLKN LEVDTHKAEA IEAGLREFHK1380
 1381 LLMNKTFLLT MVRTMEANKY FVGKDRVYVG SLLMVVLQEK MGYCTEMLKQ LLRELIEKTV1440
 1441 EKKFQPKILF RRSESIAERM LAAWFTFLLH DHLKTYDAGK KLYELFWGIK QQMEKGPQDA1500
 1501 LTLEARYSLS EEKLLRATFE YKELMVFVSA SDSVYSSTQD IPVRVLDCDT ITQVKEKCLD1560
 1561 AKYRGYRFAD RPAPGDMELE WKTGMNGKMA LQDIDSSSRV EGGNWKRLNT LAHYNVPNNA1620
 1621 ILTLTSKSNS LYNLSILSDR SEKSSVSMKT PGVGSPKPWG APPSVIADHA SSSADTDNGF1680
 1681 KLYHLVKPTE HGPTDSQEKM VTEIYLTRLL MMKGTLAKFI TSLLESIFSS STVPPCIKYM1740
 1741 FDFMDEQARE HGINDPEVVH AWKSNALPLR FWVNLIKNPH FLFDIQKPTK IEGCLSVVAQ1800
 1801 TLMDACSTQD HQLTKDSPSS KLLFAKDMYQ YRDLVDSYYT EISMTPRIDD ATMGANLSAE1860
 1861 SRQHNGEFHV FSALNELYKY LDQYKESIID ALESNEHAQA SRLPGRLQDL LALMESDYYR1920
 1921 ATDYESSTLG LGYNSNSRLM PRDRL

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