YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE36896
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKVYFKQKR KEKSCAGLLL ANAQRARNSA NGVSKDQTEE EELNNSKVET CSSSPQANQE  60
   61 ISSEDRNSHH PDIASSSSAT TCRSSNCFNM DEGILTRDVE MDFSDDIPTF SHNRFSNPVF 120
  121 PPTPSRNSFS TPRVRIISNV EQIPQIKMLR LTIERLKNEK NEISEEIQKQ NDAFAVFSEE 180
  181 IQIVRHENIT IRASNSSLQM EVCNIRTIVS GIEGRLVRSC ADVKKSGKAM VLSLQRHAEE 240
  241 VENLKKSAFK VKFSNLRNKS CIKNRFRKAL HLLQHEICLE DDVGQFIRKF TKFLNSEENQ 300
  301 SYKNKLSNFE AVDFLSKCGL SLSQMEKIKN YLTNAIGYDL LPSVKNARDL PIQLSMISSF 360
  361 KVSTSFDNKG KVITIVQCMK IAEVLAYRIE LLCNSNQFVD DGYTKGVINI GVVGDAGGGS 420
  421 TKLALVIGNV SRPNSSRHVM VIAVYDGSDN YSSLKKFIPD VLEQLGKLTK IRYLDKGVQK 480
  481 TAKIVQIATG DCKFQSDILG HQGHSSHNFC FKCFAQNPRG AEERMKIKDM NVDETFHPRT 540
  541 IDLYKACCEN GDLGVRKGCT PLLPHVAIMF YLIPLLHIIM GIFDKYIFNP LWKYSVTLDN 600
  601 TTCFPILKTR KATLKNAVNL IKSAEEKYQA ATGKMKLESH AELKALQSEK LLLDTIVNGT 660
  661 PGGTLEKMEQ CWAKFGADKQ AWFQSFCGNH LKLLLTPAVV EETFNIFGPN LCPMLLGLKS 720
  721 AMGKLSTIMS LSGNKFLNDS DVLILQNSIR GFVEDLKVAV PEETIILKLH LLVYHAPQMA 780
  781 KDVRNIGRIT EQGVESVHAI FNALERRFCN YRDKKRRYIH VLRELMCRNI MNDMTMNTSI 840
  841 PGLSIPDFSQ NVQTSIAFGG NSTKIGFRGL PSNALSRPNP MVAMTGKRSS TERGKSFSEF 900
  901 SRLYSVVSNF SYVAADEITP DILQKLEHQS RLTVRVPLKG NDASPFDGHI WFKSATPETT 960
  961 KHAPRYENAK IFGEIIKSRR CTDFENPFFT RLVLPHKEHV YIYYSVMEGR YKRPSDPNRK1020
 1021 RRLLAEDRKT LLTTVMPHRT IRGAKVATKD LGIEVSSKQL HNLHHNANGD VVMCKTGPKA1080
 1081 ITTQDMIEDA KRTHGDRLSY TVADGGVLDV TFYKSFPEAI KIFLKSCPEE SRVTEWRDEI1140
 1141 EDICQMAPQA RKVAIEELLA KTDDGVFFPS RLHVDTTYNL GDAYVTTLLG ETNTFMTTRS1200
 1201 RKNRVLPLCY MIHTSRATEV HQGFASFIVE EFRKAGGVPS GKIIPCLLMD GEFSLTEYSK1260
 1261 ALDVRVIRCD LHIYSLMIHK FKRPKADKAK PFVFGVQVKL YVFSPRGLHV QKVLRISLAK1320
 1321 GSRGDKSPFS Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle