YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE37062
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHASRSLIR TSSDLHTSIR NSSSTKHVFA CVLGSGVAGS SVAYHLTKRN IKDVLLLERA  60
   61 SDGDFGVHGV ASPSGTSFHS PGLVSASHPA HRYKPILAHS IELYSKLEAE TGVNIDFQPT 120
  121 GTIRLATNET RLAEFRKYVN RDYYKEGDVC KTTLLTPDQV RELAPDVDHS KILGALHTTN 180
  181 DGTISARALT QALVVGAKNG GAQVIDGAIP KEIKYDKEKG HWIIALEDGT LVTTRNLINA 240
  241 GGIWANDIAR LSGHALPVVV VEHQYAVLTP NKTPGPTPAI IDHDSTFYVR KSGDDYLFGG 300
  301 FESLEKTVIR EDWYKKGVPT EGSKSIQADF SRLDDAYKRA CDLIPGLQGS KVDARAAVFS 360
  361 MTPDGYPLVG PYDKNYWMST GFLDGVSSGG GIGKYLADWI VDGEPPAELF DTDASRYERW 420
  421 GDRKFFTERS RETYSMYYNW SYTDRSAGRP TDRISGVYGR LKKDGASFSF RNGWEVANSF 480
  481 NMGVQNEEYL PTLIREYEMV TNKCGVIDLS WKGKIEVKGN DAEKLMDYAI ASQIPALGKI 540
  541 SSGLMLTRHG GILGPMMIFH HDRQRSAFIL LTEPERESRD LYWLRRAAAE KKFDVQVSIV 600
  601 SEYLASLALV GPKSREVLSA LTKSDVSDEG FPQKSTRMIR LGPVGVVCAR SSTSTGQLSY 660
  661 ELFHNRAETA KLYNAVMSAG REHGIVNFGQ AALNMMRLEH GYKIWGKELT LDTNPFECGI 720
  721 GGLVDFEKKE FIGRESALEL KKKDFDRRLA LITFDTEEGC VLDDRYVPSG NEVIRIDGKE 780
  781 ARVGQITSGA YNVRLQKPIA FAWIDNAVGK NERLVVDIGD KRLFATSLET PTIPPIQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle