YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36889
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLQSMVIL IMLLLTVSLS FGKREGDSFV KYCPLGQFAF AMQIKSEKQP QPLLGMALYC  60
   61 EKISTILGLE NTITDDTVRI QFDENAKDWN TRLRCPHQSG IMGIDVKYGK HGEFIELTVY 120
  121 CGAPFDSEQN RTTMNGKKIN EKEMSAISKG FLKAIGDSES MLVNKINSDP RMGDDKYTVV 180
  181 SFKAEIEEAF KNSRKQKFFY NTGPDTSTSI NQLTIYAGEH RVGLKKCIMF ENGRQVPNTS 240
  241 TGGGSQKLNV LKQINKTLKF LFKFKTTIRD SWPSYNPPSF ASFSAAPRAK YHCTPSLNQR 300
  301 PEDPQNIQRQ SFFSLKNVEY MSASC

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	325	0.99