YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36877
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAQINHYRK SSRLQIDHFS LIFVSSMASQ LLRSTNSRYV AGVLAALGAG CAVYTHYTGN  60
   61 SKAGQSLFSE RKIFYKSLNI IFQQLQAKSE VDAATIKKIE EAYVKLNGPE GAKCKSLLRK 120
  121 YLTKDIVEKL KTKCTKLGAS VYDCILTGLR FVRQGLRFVA LFNKNIEDFY GFSPKEKQPP 180
  181 VDLGEGKTKE FPPLDPNGNQ ENYLEMEGKV KRDFSEYSHK ELKRKYYPLY VRGIYGEHSK 240
  241 CTTE

Type	Start	End	Confidence
Cytoplasmic	1	38	0.57
Transmembrane Helix	39	58	0.77
Non-Cytoplasmic	59	244	0.71