YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE37224
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	10	0.88
Transmembrane Helix	11	30	0.94
Non-Cytoplasmic	31	96	0.95
Transmembrane Helix	97	117	0.94
Cytoplasmic	118	125	0.85
Transmembrane Helix	126	144	0.97
Non-Cytoplasmic	145	150	0.77
Transmembrane Helix	151	173	0.95
Cytoplasmic	174	197	0.87
Transmembrane Helix	198	218	0.83
Non-Cytoplasmic	219	224	0.60
Transmembrane Helix	225	243	0.92
Cytoplasmic	244	301	0.93
Transmembrane Helix	302	323	0.84
Non-Cytoplasmic	324	340	0.83
Transmembrane Helix	341	361	0.90
Cytoplasmic	362	371	0.81
Transmembrane Helix	372	390	0.94
Non-Cytoplasmic	391	402	0.85
Transmembrane Helix	403	424	0.90
Cytoplasmic	425	436	0.77
Transmembrane Helix	437	458	0.89
Non-Cytoplasmic	459	466	0.80
Transmembrane Helix	467	487	0.96
Cytoplasmic	488	522	0.97

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLNINRFH ILCFFLWQFG LFYACQLIFP IFYNFHPGLS CEDPGFNFSK PKCKLSKVEI  60
   61 CTELTANCSK WHIEPAPFHS MVQDFKMFCG TKAYDSAWIA TIQFIGALVG ALVYGHLGDH 120
  121 FGRKPVSFVG ISIGIIFGVA SGFAPSWEVF AVLLFICGTS VACIMIVFYA YILEFIEPEQ 180
  181 RVFLRTFFNW VRYNKPDLGV IMGFQGYARL VFTLVCFICG YWRSAAIATS LLALPILPVL 240
  241 LWLPESPKWY ATKNRFQEMK EAEKKISWLS GISYVEREDR RTEKIEEKDT KVYTIRDLFS 300
  301 SWPIAYSTIV VGSLWFSTSV SSFGADLNSG NLAGNFYLSQ FVQAAAIALS KLSIFLLDLF 360
  361 IPSFNRQRLH QVPQIIMIAC YTTIMALMIS PDSDCSSQGS RNLAIIIINI IGTSFIELTW 420
  421 DACYLVAAEI FPTRIRTIGI GTCSLLARIG ALLAPQMAYL SEIYPPIPYI IVCSIGIISL 480
  481 LISCFFLPDT KGVDLGALDR NPLEESGDNK EEEISEIQIG TN