YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36832
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNHAKCQFS ALSGVAQKIK DNIRSSLVNL KLLFDSQEPP EFDHQKFIMS IVIMILLLKL  60
   61 IFLILFIVLV VFTLHILFTN SYHLKLEFAL KSMFEEKIVN LNVGGKPFAT LKTTLQKFEG 120
  121 NLKELPEIQG ESLPTARIFI DRPYKHFETI LNFLRDGDVI LPESMESLKE LLHEAILYKL 180
  181 SGLSEKCQEA IARLGREPIP VLPSKIEKTA TPPTIGDPVT SSSDSTESPL IPEQPDNNEI 240
  241 QKSWIREKIM NIVNTTFNLI SKCREFLEAV EDVLRFVEGN IDPISSTAGN IIRLLQLVGQ 300
  301 LRIFQDYLGR FSHFNFP

Type	Start	End	Confidence
Cytoplasmic	1	54	0.95
Transmembrane Helix	55	78	0.91
Non-Cytoplasmic	79	317	0.96