YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE36827
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVKKVKEKL SRPWVAVNLL LLIVFLAMVT VHIKVEPVNL DELLSIGNDV DSKNLSTTKT  60
   61 HQWIRVWTSF SILVEDSMNS QYLNQDFKKR NIFFGNRFEF LHKIQNSTSK SENLMKLVFD 120
  121 KCEASKKTSN DNYKISRDAI HDVFNDIKKI GAWPLLDKNW DGSKFDLNEM LSNLVKLGAT 180
  181 NLGLFQLDFR ILTEGKFVRI APTLGSIVHN STMISMISEI LEANGVQPDS EEISKEFEEY 240
  241 SSLQMKLAKY QSSGKLSISL PGVRSINFSS LITEMIHPSR VSKIFGKIRV VTSEHPLFFK 300
  301 SNETESLDTI IESTSNKTLA NFLIFNYIQS SYNIMKGARR GNCEDDVRRE FPRASLRVFM 360
  361 RNFVDKGNRD GVKKLTEELK KNTLEMIQDT ENLAPPVKES MLKKVEAIKV TIGYPDHFDP 420
  421 PGTLDKEFEN VWFDLDSTDS YYRIFQKLNR LRSEQQMEFI AGETPISPIK EVLKVNANYK 480
  481 RSKNALTVFA PFLDDPFFDI TYPDYVNLFF SGFLIAHEIG HSVDANGLGY DENGKPMDGI 540
  541 RLEHVTEYGK QGQCLVDQYD NYDDPVYGKK MNGTHSINEI IADWVGHEVT WRAYKKMDTS 600
  601 KMLSLIGLKD INMDQLYFRV QSLLFCRERD TISLEETLKD VYPTDNFRVN GAYARVCGGV 660
  661 QLSGYITYES GEEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle