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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kcnl-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASPMLQHM YSLDESSLMG VSHHSPYRQQ RKRRAGISGA ATGGSHQRDG PFACAGGNGY  60
   61 SSAGFSNGRG FPPLGGRSPQ SSFDSNQDVA QISMNWMRMN GLGPSLRPFL NSGNHTPKKT 120
  121 VIHNSQSTNH ISRIGSLRRM HAADASIDGK LSLSGTQGET ASRKSVSIAY SNDLEAGGKG 180
  181 NGAIGDDSTV PLMDEKDDNS GGRLIRREIL HEKRRHVSDR ALAFAIMGII LMIIENELRT 240
  241 AYVIRPGSSL SHLLKFFIIF TTTALLSFVG YFHVIEIQLF MNANAADDWM VALSFRRTCQ 300
  301 IGLELLICML CPLPIEFIAP FMNDRFHDKT LYAVNVFLSI MMFFRLYWLC RVMLLHSRVF 360
  361 TDASSRSIAG LNRVNFNARF ILKTLMTICP GTMLMIFTAF LWIIAGWILR LCEREYMTPD 420
  421 KYNDINYVNS IWLVAITFLS VGYGDIVPKT NCGRSMAIVT GILGTCASSM VVAVIARKLE 480
  481 LTRAEKHVHN FMQDTQLTKQ LKHSAANVLR ETWFIFKFRK LVEKPDFGKI RKHQRKFLLA 540
  541 IYEMRRVRRD QRKLAENLVS LGDVAKTSSN TYELVHDVHS TQEGLSLRIT AIEHQLSDIS 600
  601 RELSSLAELL RGSVIITSDQ MSNERKVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle