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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE36478
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQRSIFHFY LNILLIACVT VVGLTYFYSN YCSNNLNSRE RYRLHSAIQP VAEIRPGNKW  60
   61 IVVTSISLPT EDVKRLASFT DWNLVVVADT KTPLDWELEN AHFLSVEFQK KSPFSLVSSL 120
  121 SYKSYTRKNI GYLYAISQGA EWIYDTDDDN KPYDMLGLNQ FNFKETTSGV RFRPANGTAT 180
  181 EIQQRLFNPY RFYGMDQMWP RGFPLEHFVK HTNGNETQVL CYKMKRAAVQ QGLVHHDPDV 240
  241 DAIYRLQHAD SRSGLNVKFN KFAPPITLSV GTYSPWNSQN TMFHKSAFHT LFLPTTVSFR 300
  301 TTDIWRSFIS QKILHLSGLT VSFVPTNAVH FRNAHNYLKD FKDEQQVYED SGRIIEFLHN 360
  361 WNCKTGSSIQ SCIVQLANDL VEVKLLGEED ESLMEMFLND LTALGFEFPS LIGDNYVDPY 420
  421 APSANESSRE VNCRRMYLEF KLVDPNTNVS EISRTSQEKL NYFGDIIKWC NETRKSSVSI 480
  481 NFPSPKQLAS LHEKSYVLKK HMDSVLIVVN NYPWKYGMGL IQRLYQPYFA TVIFCGSWYP 540
  541 AEFSDDTNFT PTLFPINYIH MNPAEIEKGY FAYHCVTLAK ELGLHDVEGY FLVADDTVFN 600
  601 IWQRIDFSRV HHLTGVTCED SPIWWSIADV GMDAAKRVVG YINNSTAPEI AETWTKFETG 660
  661 LKKNGYVKNN LTVMDEMTSG LGRSVSDFFY IPTSESEYYA SLMRIFYKNK LFLEIAVNKF 720
  721 LKSVNHQTSL SGNSSYLWGN DRNIWDTFYS RDMVAMHPLK LGYLKTPNEH RIRYCKTIIQ 780
  781 SWSDIIFGGS QDFKVKADND TDYKNG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle