YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36473
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRPKLFPVL LAISVFFLNY TSGIARENCT RNGWLDNSTS PETQDFGSEF VISFADIHRN  60
   61 YSWLYLPEIE ETSQEKDILI IVASRTDSYA RRNILRQTWM SKANSEIVAN GRMKPLFLVG 120
  121 LTPGEYKMKK MVMQEAKLYG DIIVVDMNDN YEELTYKSLA ILLYGVSKAP RYQMIGKIDE 180
  181 DVMFFPDKLT ELYDQGFIDA TPLRIYGLKM QSGANIFRDK THRWYVPESS YSCSKFPEYV 240
  241 SGMLYMVTWE AAQQIIKSTK YRDFIQVEDV FLTGILAEDL GISVKNLPEF YKYPSDIEES 300
  301 NPGDVIAWHT DKDDIPYLKF LMKYE

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	325	0.99