YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36284
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVQILFTFC IMMTTIQTII DLREAKNRTF NQFVVDPNER TTNECLLEDP LQRALHIFLD  60
   61 TCPTFYDSIC DDPLFNQYNE FEFRCRYPRN KIQVGGVDEF IKLFGINEST RYIRKRLVMF 120
  121 HSPSCPFSAR LAPYFNEIAG SYTNILPVAI DASDFTKSHR LNFRYGVSGT PTILLWVNGM 180
  181 SVARMSNKKL DLESIKALIA THTDLVENKN GKNNQSFIPV KLENVGYEVK DVATEITENR 240
  241 LVNGLYIFAC LLVCLATFIY HVRERILLSA PVLQWFQSKC GGPLCEDIYF LFYVAAPRNR 300
  301 HPPPAPQAPP EAAELPPLVI EDE

Type	Start	End	Confidence
Non-Cytoplasmic	1	241	0.67
Transmembrane Helix	242	262	0.78
Cytoplasmic	263	323	0.55