YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36803
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTPFNIARC STRLIRRKPP GGGILDEGVT FSDVHNVILN PTTRLPYPEE QLREHIEKTS  60
   61 SEIMKERNKI RYGTRKKKDS GAIDFSQLPI EEHVVLLFPG QGAQFVGMGQ KVMDIPAARR 120
  121 VFDEASEVLG YDMLKVCQDG PKQKLEQTLY CQPAIVTSSI AAFEALKASD PSIEENLTDT 180
  181 AGFSVGEYAS LVAGKVLSFS DAIKIVKTRA EAMSECAKLV KSGMVTIRVK AASKLDKAMA 240
  241 DARKVAAENR ELVVCEVANY LYCGVRVIGG SETCLKYLEE NQEKYNIQVM KRLAVSAAFH 300
  301 TRQMESAVEQ VAKAFQNVEI HRPVCNVWSN YSGKVMSSKK GDVRGAVAKQ INSPVRWEQI 360
  361 QQSLFRKHQN EAFPRFYEVG AGRQLVAELI FFIVCVIFML ALYIMLALYL L

Type	Start	End	Confidence
Cytoplasmic	1	384	0.51
Transmembrane Helix	385	410	0.84
Non-Cytoplasmic	411	411	0.51