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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-19
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGGAINMAI QKLRDDGFIA PFDFEVTVNY TECDRSLGAA VGMEFMRTKR LDVVIGPPCR  60
   61 DRKSLSFRAS SQFIISAMEI MATMATYYST PMLGWGLVTD SKFTDTERYP YLTNIMANSL 120
  121 SLGFSLVKLL EMMEWDRVAL VYEESAQDYP LSVINDVETA INEYDTFAVN VVVKQALPGG 180
  181 DLNDAQYISV LNRIKLRCRI IVSVFQTAPT RRRYLKMIDQ QGMANEEYVH ILLGLRSIGF 240
  241 GKQSAGLTKC ELNCLSSGLA PFWDIAPDDG LNDRLKQAAT RMLVMDLSTD VPDINYLNTF 300
  301 TMNCGAVVVN PPVSCATPAC INASTSPPSA FARSLHDVFY LYGLAITNLY NQDPAYLNDI 360
  361 DKINGALQLN FAGLTGEVSI NANNSRVPKL MLYALNDKYD QASFMNLTYS LNGGAVSVSL 420
  421 AYTNEASLWY WYGGKRPLSV PVCGFAGTDC PQSFVDQYGA LVFAIGGVLI FAMLFVITCF 480
  481 FYVMRQKRLE RDRIDAEWQI PLVKLQAPPK RDKERMSKRS LQSGPSNITD TSKMTFDNTF 540
  541 SNYSIFYLDK EPVLSTAHPA SNLIRTDYDT FVRLRKLDHE NVNKFVGMSI DGPEYLAVWK 600
  601 LCMRGSLQDI IGQGNFSIDP FFMFCVIRDM AEGLKYLHNS FLHVHANLRS GTVLVNESWQ 660
  661 AKLTDFGLGT LAEEKKPMKR RQLWMAPEVI RGTLLPHQIE KSADIYSLAV IASEVLTRKE 720
  721 AWNMAERKDT VDEIVYRIKK GGPNAPRPEL DMDGVEINHN LLILIRDCWS EEPADRPSAD 780
  781 VICNLLKNMM PKKGNLMDHV FNILEDYTTN LEVEVEDRTK ELTAEKKKAD VLLGRMLPKQ 840
  841 VAERLKQGQT VEPEGFDSVT VFFSDVVKFT QLAAKCSPFQ VVNLLNDLYS NFDAIIEEHG 900
  901 CYKVESIGDG YLCVSGLPSK NGNAHIKQIV ELSLDFMSYC KSFKIPHLPR EKVELRIGVN 960
  961 SGPCVAGVVG LSMPRYCLFG DTVNTASRME SNGKGRQMAL KSSSHIHLSA ASYTLLMKHY1020
 1021 PNQYNTASRG DVIIKGKGVM ETFWVFERNN QFMGVSSNSG YQSDKKATNN GSSPESTPPS1080
 1081 TPPMHEVKAN SPVRHRKPPS PSSPTLSKRS VSPIMEAKAR DIHNEETEAL YRQFRRQETL1140
 1141 ALI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle