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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE36372
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDVDLGKDR TQLIDFVYAN GNGSASNLNN RNNIPLSEKA AKEPLQTQPQ EAPPAPKPKV  60
   61 QKQKPPVKPK KRIACSPGSA ICLFLLAVAA IIFAAFLGHY LTKQNYEMMQ FKSANESMTT 120
  121 CKNFTRSHKK HQDIVNEEDA DENASIKQPT KEELALPKNV QPVWYDVSLS PKVGGNGTMG 180
  181 LAHVKLNIEE PTNKIVLNAK DIEFTRNLEK IQLSKEVTKR AKKSVDSGTN STSEMPEGSG 240
  241 EEAMATTATT TTTESTTPVS SFVDTGIKVT NIEFDENLEK VTLTLDQELK KGSTVVLKIP 300
  301 FTSKVSNNNG LKEYKYKNSE GKEQSMFTTQ PSYSYLRHVF PSFDQEAFKA PAAITLMHSK 360
  361 GSIVVANTGV KTKDDGDAQT STLNKVLDPD FVIGDLVASE VNTTSGITIR IWTRPEVKHS 420
  421 TEQSLDYANQ AIDAMEHILQ SRLESKSLDI VAVPGFQTGN RVSPSFIVLP EEDILYNEQS 480
  481 NDINQKTRIA RMISNRIAAQ WFGGITNPEE FGTFWLNEAL PRFLEVEALE KILDINSDDL 540
  541 WTYEMEKILE RDATATSQPL RVKNVFSSAD IAEIDHEFIG KKGAAVLRMI QKSVGVNVFN 600
  601 KAIRSFVSSY RSAYPYDDGL WKSFEKALGG KLKGWNNEPL DVAKFVNTWV DQIGFPLVSV 660
  661 EKLDDETVEL SQERFKNDHK TKEQFKFRNA KYWFNWEVPL FLKSSGPVGN VSWLHEAFRL 720
  721 PLNTSDSIYL NTDSNGVYRV NYEEKRWNDI AKQLEKSHGK LSERTRARLI SDVFALANSG 780
  781 ALPFETALNV TSYLPMETAT VPWLIATRIF KKLTERLEGA PIQDKLNSFI YQKIHKKFEE 840
  841 ISSSPGEASS NYLKNRLYAN LLDLMAIVKP EKSNEKLNEL FVEGFLAPCQ FSGNFSSDCS 900
  901 EVPGDLREKV YCNGVEFGND TVFETVRELA EKEVDGAEKD LLQNSLACFR DPRALRRLIL 960
  961 DNLNSTSTVT LLLRKMNSRP VGKEIATNWI IDNWSTVLKK KFKNDPETLN AIADAGIILD1020
 1021 NEREKSMIET FMEHHHKSTH GIESLDKKIE EATTDIYWRK QKINELNDYL DGKMKGPAKD1080
 1081 DEMESSEEQE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle