YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AIM27
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTINQHLQQL LFNRIDKTTS SIQQARAPQM LLDDQLKYWV LLPISIVMVL TGVLKQYIMT  60
   61 LITGSSANEA QPRVKLTEWQ YLQWAQLLIG NGGNLSSDAF AAKKEFLVKD LTEERHLAKA 120
  121 KQQDGSQAGE VPNPFNDPSM SNAMMNMAKG NMASFIPQTI IMWWVNHFFA GFILMQLPFP 180
  181 LTAKFKEMLQ TGIICQDLDV RWVSSISWYF ISVLGLNPVY NLIGLNDQDM GIQAGIGGPQ 240
  241 GPQGPPQSQV DKAMHAMAND LTIIQHETCL DNVEQRVLKQ YM

Type	Start	End	Confidence
Cytoplasmic	1	37	0.69
Transmembrane Helix	38	58	0.80
Non-Cytoplasmic	59	159	0.57
Transmembrane Helix	160	181	0.79
Cytoplasmic	182	282	0.52