YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FMO1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVNDKKRLA IIGGGPGGLA AARVFSQSLP NFEIEIFVKD YDIGGVWHYP EQKSDGRVMY  60
   61 DHLETNISKK LMQFSGFPFE ENVPLYPSRR NIWEYLKAYY KTFIANKDAI SIHFSTEVTY 120
  121 LKKKNSQWEI TSKDELRTTK SDFDFVIVAS GHYSVPKLPT NIAGLDLWFD NKGAFHSKDF 180
  181 KNCEFAREKV VIVVGNGSSG QDIANQLTTV AKKVYNSIKE PASNQLKAKL IETVQTIDSA 240
  241 DWKNRSVTLS DGRVLQNIDY IIFATGYYYS FPFIEPSVRL EVLGEGVTGD KHSSVNLHNL 300
  301 WEHMIYVKDP TLSFILTPQL VIPFPLSELQ AAIMVEVFCK SLPITTTFDS NACGTHNFPK 360
  361 GKDLEYYAEL QELLNSIPRR VGHFEPVVWD DRLIDLRNSS YTDKEERNVL LAEHAQALKK 420
  421 KKAPYFLPAP HT

Type	Start	End	Confidence
Signal Peptide	1	20	0.66
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	432	0.99