YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SCS22
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIVPEKLVF KAPLNKQSTE YIKLENDGEK RVIFKVRTSA PTKYCVRPNV AIIGAHESVN  60
   61 VQIVFLGLPK STADDEMDQK RDKFLIVTLP IPAAYQNVED GELLSDWPNL EEQYKDDIVF 120
  121 KKIKIFHSVL PKRKPSGNHD AESARAPSAG NGQSLSSRAL LIITVIALLV GWIYY

Type	Start	End	Confidence
Cytoplasmic	1	153	0.90
Transmembrane Helix	154	174	0.88
Non-Cytoplasmic	175	175	0.94