YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|151942980
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPAKLQLDV LRTLQSSARH GTQTLKNSNF LERFHKDRIV FCLPFFPALF FVPVQKVLQH  60
   61 LCLRFTQVAP YFIIQLFDLP SRHAENLAPL LASCRIQYTN CFSSSSNGQV PSIISLYLRV 120
  121 DLSPFYAKIF QISYRVPMIW LDVFQVFFVF LVISQHSLHS

Type	Start	End	Confidence
Cytoplasmic	1	137	0.71
Transmembrane Helix	138	158	0.80
Non-Cytoplasmic	159	160	0.72