YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SDH31_ARATH, SDH...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATALFRSI RRRDVVSAPL SVYKSLAGNA QPSWGSSYIG QNYASFSRAF GSKPVVNDIL  60
   61 GTGLGTNNAI REEREKSKST EAAIVGAQLT RSFRALDVGT SKRLFSTISG DIKTTQEEPK 120
  121 IKSFRPLSPH LSVYQPQMNS MLSIFNRISG VYLTGVTFAG YLLYLKMGMI CLTYPSFYQV 180
  181 LYHTQQQLPV ITSVTALAAI YHTIKSTHSL LTH

Type	Start	End	Confidence
Cytoplasmic	1	147	0.84
Transmembrane Helix	148	165	0.87
Non-Cytoplasmic	166	185	0.73
Transmembrane Helix	186	204	0.77
Cytoplasmic	205	213	0.75