YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7442161, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLAKVSCFL LAIMFFINGG SSTTFTIVNQ CNYTVWPGLL SGAGTAPLPT TGFSLNSFES  60
   61 RLISIPAAWS GRIWGRTLCN QNEITGIFTC VTGDCGSSQI ECSGAGAIPP ATLAEFTLNG 120
  121 AENLDFYDVS LVDGYNIPMT IVPYGGAIGV GKCNATGCAA DLNGLCPEQL KVTVEAAGTG 180
  181 AVACKSACEA FGTPEFCCNG AFGTPDTCQP SEYSVFFKKT CPTAYSYAYD DGTSTFTCSG 240
  241 ADYVITFCPS PSR

Type	Start	End	Confidence
Signal Peptide	1	22	0.77
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	253	0.83