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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20260422, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYVLVTGGV VSGLGKGVTA SSIGLLLQAC GLRVTSIKID PYLNTDAGTM SPFEHGEVFV  60
   61 LDDGGEVDLD LGNYERFLDS TLTRDNNITT GKIYQSVIDK ERKGDYLGRT VQVVPHVTDA 120
  121 IQEWIERVAN VPVDGKEGPP DVCVIELGGT IGDIESMPFI EALGQFSYKV GPGNFCLVHV 180
  181 SLVPVLSVVG EQKTKPTQHS VRGLRSLGLT PNILACRSTK ALEENVKTKL SQFCHVPEVN 240
  241 IVTLYDVPNI WHVPLLLRDQ KAHEAILREL NLSNAIKPDL TEWTARTKIY DTLQDPVRIA 300
  301 MVGKYTGLTD SYLSVLKALL HASVACHKKL VIEWVAASDL EEITAQETPD VHKAAWDLLK 360
  361 GADGILVPGG FGDRGVQGKI LATKYARENQ VPFLGICLGM QLAVVEFARS ILGFHDANST 420
  421 EFEPETSSPC IIFMPEGSTT HMGGTMRLGS RKTYFQVADC KSAKLYGNAK FVDERHRHRY 480
  481 EVNPDMISEI EKAGLSFVGK DETGRRMEIV ELPSHPYFVG AQFHPEFKSR PGKPSALFLG 540
  541 LIAAASGCLE SVLQTGGKVN IVSKNGVANG SAMGKVHQNG NVYSNGNGLH H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle