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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLCC_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ  60
   61 LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD IEISSSGVGS LQKQNHTKKS 120
  121 KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE 180
  181 YLAPPLQFLA NGCIVLFLVQ SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL 240
  241 PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL 300
  301 GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE 360
  361 EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV FLNFFGFNGT AGVWRIKALE 420
  421 DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL 480
  481 FRLCLPAVIK SKISIGKKFN LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV 540
  541 VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS 600
  601 GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL 660
  661 LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle