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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5903062, gi|2...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEIRLSPLR QTSVKSSLSG RSTPRGTPRV YSGRTPRRGH GGGGAFQWFR SSRLVYWLLL  60
   61 ITLWTYLGFY VQSRWAHDNE SKVEFLRFGG RPRKDELYME KIKGLDVVAN ENSEALVNIT 120
  121 GKDDAGSNKR TDVSLIKKDD GVSRRSLSSK QKTRKTVRTS RSKIRVKQKV IKEVLETKDL 180
  181 DDEQDPQLPL TNATYGKLLG PFGSLEDKVL EWSPHRRSGT CDRKSDFKRL VWSRRFVLLF 240
  241 HELSMTGAPI SMMELASELL SCGATVSAVV LSRRGGLMQE LSRRRIKVVE DKGELSFKTA 300
  301 MKADLIIAGS AVCTSWIDQY MNHHPAGGSQ IAWWIMENRR EYFDRAKPVL DRVKMLIFLS 360
  361 ESQSRQWLTW CEEEHIKLRS QPVIVPLSVN DELAFVAGIP SSLNTPTLSP EKMRVKRQIL 420
  421 RESVRTELGI TDSDMLVMSL SSINPTKGQL LLLESIALAL SERGQESQRN HKGIIRKEKV 480
  481 SLSSKHRLRG SSRQMKSVSL TLDNGLRREK QELKVLLGSV GSKSNKVGYV KEMLSFLSNS 540
  541 GNLSKSVMWT PATTRVASLY SAADVYVTNS QGVGETFGRV TIEAMAYGLA VVGTDAGGTK 600
  601 EMVQHNMTGL LHSMGRSGNK ELAHNLLYLL RNPDERLRLG SEGRKMVEKM YMKQHMYKRF 660
  661 VDVLVKCMRP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle