YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CHI59_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTKISLVL LLCLLGFFSE TVKSQNCGCA PNLCCSQFGY CGTDDAYCGV GCRSGPCRGS  60
   61 GTPTGGSVGS IVTQGFFNNI INQAGNGCAG KRFYTRDSFV NAANTFPNFA NSVTRREIAT 120
  121 MFAHFTHETG HFCYIEEING ATRNYCQSSN TQYPCAPGKG YFGRGPIQLS WNYNYGACGQ 180
  181 SLGLDLLRQP ELVGSNPTVA FRTGLWFWMN SVRPVLNQGF GATIRAINGM ECNGGNSGAV 240
  241 NARIGYYRDY CGQLGVDPGP NLSC

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	264	0.99