YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HS235_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSALALR RLLSSSTVAV PRALRAVRPV AASSRLFNTN AARNYEDGVD RNHHSNRHVS  60
   61 RHGGDFFSHI LDPFTPTRSL SQMLNFMDQV SEIPLVSATR GMGASGVRRG WNVKEKDDAL 120
  121 HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI 180
  181 KAEMKNGVLK VVIPKIKEDE RNNIRHINVD

Type	Start	End	Confidence
Signal Peptide	1	25	0.97
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	210	0.99