YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLC5_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL  60
   61 LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL GRDRWLFTAI KLFLAVSLVI 120
  121 LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI 180
  181 VLFLIQSVDR LVLCLGCFWI KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE 240
  241 VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG 300
  301 YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK 360
  361 DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW RIKALEESGG WLERTTVEDM 420
  421 DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA 480
  481 IWKKANLILL FFLLRKLILP FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL 540
  541 PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK 600
  601 ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS 660
  661 LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle