YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110739046, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERNVEKMLK RVSIVFLSIG TVLMVIMILQ TPKTCISPEA PSKPHTHFPR STCDSSPRQH  60
   61 LPLPKKNARI WSSGAWKSRL YSFSTYFLRF RDLGFIQNHT KALCLSAGAG HALMALSQIG 120
  121 LSDVTAVELV DSIPLVKRAD PHNLPFFDGV FDFAFTAHLA EALFPWQFVE EMERTVRRGG 180
  181 FCVVSVDECG GDDVRDIARL FHNSKVVDVA NVTLEGSKKT SILFKVQDSP T

Type	Start	End	Confidence
Cytoplasmic	1	11	0.86
Transmembrane Helix	12	29	0.96
Non-Cytoplasmic	30	231	0.96