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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME34_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYERLGPSG ATGSVTTSTT TAPILNQVST SEQPENNNRR SKKKLVVSSI VLAISLILAA  60
   61 AIFAGVRSRL KLNQSVPGLA RKPSQAISKA CELTRFPELC VDSLMDFPGS LAASSSKDLI 120
  121 HVTVNMTLHH FSHALYSSAS LSFVDMPPRA RSAYDSCVEL LDDSVDALSR ALSSVVSSSA 180
  181 KPQDVTTWLS AALTNHDTCT EGFDGVDDGG VKDHMTAALQ NLSELVSNCL AIFSASHDGD 240
  241 DFAGVPIQNR RLLGVEEREE KFPRWMRPKE REILEMPVSQ IQADIIVSKD GNGTCKTISE 300
  301 AIKKAPQNST RRIIIYVKAG RYEENNLKVG RKKINLMFVG DGKGKTVISG GKSIFDNITT 360
  361 FHTASFAATG AGFIARDITF ENWAGPAKHQ AVALRIGADH AVIYRCNIIG YQDTLYVHSN 420
  421 RQFFRECDIY GTVDFIFGNA AVVLQNCSIY ARKPMDFQKN TITAQNRKDP NQNTGISIHA 480
  481 SRVLAASDLQ ATNGSTQTYL GRPWKLFSRT VYMMSYIGGH VHTRGWLEWN TTFALDTLYY 540
  541 GEYLNSGPGS GLGQRVSWPG YRVINSTAEA NRFTVAEFIY GSSWLPSTGV SFLAGLSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle