YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ANT1_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	35	0.90
Transmembrane Helix	36	55	0.88
Non-Cytoplasmic	56	60	0.67
Transmembrane Helix	61	81	0.92
Cytoplasmic	82	114	0.93
Transmembrane Helix	115	136	0.87
Non-Cytoplasmic	137	142	0.79
Transmembrane Helix	143	165	0.86
Cytoplasmic	166	172	0.61
Transmembrane Helix	173	193	0.82
Non-Cytoplasmic	194	216	0.84
Transmembrane Helix	217	238	0.88
Cytoplasmic	239	252	0.91
Transmembrane Helix	253	276	0.90
Non-Cytoplasmic	277	293	0.94
Transmembrane Helix	294	316	0.92
Cytoplasmic	317	348	0.96
Transmembrane Helix	349	370	0.82
Non-Cytoplasmic	371	375	0.53
Transmembrane Helix	376	397	0.85
Cytoplasmic	398	407	0.70
Transmembrane Helix	408	429	0.87
Non-Cytoplasmic	430	432	0.75

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIKDLTATT GDSSLPLIKS PPSETTGGDR TSALQTLGNI IVSIVGTGVL GLPYAFRIAG  60
   61 WLAGSLGVII VGFATYYCML LLIQCRDKLE SEEGEEESKT YGDLGFKCMG TKGRYLTEFL 120
  121 IFTAQCGGSV AYLVFIGRNL SSIFSSYGLS MVSFILILVP IEVGLSWITS LSALSPFSIF 180
  181 ADICNIIAMC FVVKENVEMV IEGDFSFSDR TAISSTIGGL PFAGGVAVFC FEGFAMTLAL 240
  241 ESSMREREAF PKLLAKVLAG ITFVYVLFGF CGYMAYGDQT KDIITLNLPN NWSAIAVQIG 300
  301 LCVGLTFTFP IMVHPLNEII EQKLKRIDWL QKHHNGYSNE TGSVSKFAIF TTRTLLVVGL 360
  361 AAIASLVPGF GTFASLVGST LCALISFVLP ASYHLTLLGP SLNVWNKSID VFIVICGLIF 420
  421 AVYGTYNTIV GV