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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PDI14_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFRVLLLFS LTALLIFSAV SPSFAASSSD DVDDEDLSFL EDLKEDDVPG ADSLSSSTGF  60
   61 DEFEGGEEED PDMYNDDDDE EGDFSDLGNP DSDPLPTPEI DEKDVVVIKE RNFTDVIENN 120
  121 QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL 180
  181 FFVDGEHKPY TGGRTKETIV TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG 240
  241 VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK 300
  301 SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG 360
  361 KLIFVSVDLD NEDYGKPVAE YFGVSGNGPK LIGYTGNEDP KKYFFDGEIQ SDKIKIFGED 420
  421 FLNDKLKPFY KSDPIPEKND EDVKIVVGDN FDEIVLDDSK DVLLEVYAPW CGHCQALEPM 480
  481 YNKLAKHLRS IDSLVITKMD GTTNEHPKAK AEGFPTILFF PAGNKTSEPI TVDTDRTVVA 540
  541 FYKFLRKHAT IPFKLEKPAS TESPKTAEST PKVETTETKE SPDSTTKSSQ SDSKDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle