YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GATL5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHWITRFSAF FSAALAMILL SPSLQSFSPA AAIRSSHPYA DEFKPQQNSD YSSFRESPMF  60
   61 RNAEQCRSSG EDSGVCNPNL VHVAITLDID YLRGSIAAVN SILQHSMCPQ SVFFHFLVSS 120
  121 ESQNLESLIR STFPKLTNLK IYYFAPETVQ SLISSSVRQA LEQPLNYARN YLADLLEPCV 180
  181 KRVIYLDSDL VVVDDIVKLW KTGLGQRTIG APEYCHANFT KYFTGGFWSD KRFNGTFKGR 240
  241 NPCYFNTGVM VIDLKKWRQF RFTKRIEKWM EIQKIERIYE LGSLPPFLLV FAGHVAPISH 300
  301 RWNQHGLGGD NVRGSCRDLH SGPVSLLHWS GSGKPWLRLD SKLPCPLDTL WAPYDLYKHS 360
  361 H

Type	Start	End	Confidence
Signal Peptide	1	30	0.96
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	361	0.99