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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT49_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRADSFCL ISCVLVSFVI SVSAVTDDSQ DKQVYVVYMG SLPSSRLEYT PMSHHMSILQ  60
   61 EVTGESSVEG RLVRSYKRSF NGFAARLTES ERERVAEMEG VVSVFPDINY KLQTTASWDF 120
  121 LGLKEGKNTK RNLAIESDTI IGFIDSGIWP ESESFSDKGF GPPPKKWKGV CSAGKNFTCN 180
  181 NKLIGARDYT NEGTRDIEGH GTHTASTAAG NAVKNTSFYG IGNGTARGGV PASRIAAYKA 240
  241 CSEMGCTTES VLSAFDDAIA DGVDLISISL GANLVRTYET DPIAIGAFHA MVKGILTVQS 300
  301 AGNGGPNPGS VMSVAPWILT VAASNTNRGF VTKVVLGNGK TFVGKSLNAF DLKGKNYPLY 360
  361 GGSTDGPLLR GKILVSEDKV SSEIVVANIN ENYHDYAYVS ILPSSALSKD DFDSVISYVN 420
  421 STKSPHGTVL KSEAIFNQAA PKVAGFSSRG PNTIAVDILK PDVTAPGVEI LAAFSPLNSP 480
  481 AQDKRDNRHV KYSVLSGTSM SCPHVAGVAA YIKTFHPEWS PSMIQSAIMT TAWPMNATGT 540
  541 AVASTEFAYG AGHVDPIAAI NPGLVYEIGK SDHIAFLCGL NYNATSLKLI AGEAVTCTGK 600
  601 TLPRNLNYPS MSAKLPKSES SFIVTFNRTV TNVGTPNSTY KSKIVLNHGS NLKVEVSPSV 660
  661 LSMKSVKEKQ SFTVTVSGSN IDPKLPSSAN LIWSDGTHNV RSPIVVYTYS VSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle