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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30725426, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTSTSSLM ASKTVISKTA LFSSLPGIVS RSFLTFAPAS PSVKPLRIRS SNVTKFDEVT  60
   61 NSLDEDMDQI RRLQNGSDVR GVALEGEKGR TVDLTPAAVE AIAESFGEWV AATESNGNGV 120
  121 IKISLGRDPR VSGGKLSTAV FAGLARAGCL AFDMGLATTP ACFMSTLLSP FEYDASIMMT 180
  181 ASHLPYTRNG LKFFTKRGGL TSPEVEKICD LAARKYATRQ TKVSTLIRTR PQQVDFMSAY 240
  241 SKHLREIIKE RINHPEHYDT PLKGFQIVVN AGNGSGGFFT WDVLDKLGAD TFGSLYLNPD 300
  301 GMFPNHIPNP ENKIAMQHTR AAVLENSADL GVVFDTDVDR SGVVDNKGNP INGDKLIALM 360
  361 SAIVLKEHPG STVVTDARTS MGLTRFITER GGRHCLYRVG YRNVIDKGVE LNKDGIETHL 420
  421 MMETSGHGAV KENHFLDDGA YMVVKIIIEM VRMRLAGSNE GIGSLIEDLE EPLEAVELRL 480
  481 NILSEPRDAK AKGIEAIETF RQYIEEGKLK GWELGTCGDC WVTEGCLVDS NDHPSAIDAH 540
  541 MYRARVSDEE SGEEYGWVHM RQSIHNPNIA LNMQSMLPGG CLSMTRIFRD QFLEASGVAR 600
  601 FLDISDFDNY IGGQS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle