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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VCL22_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKNKRAIGF LLLVVLINGV MMTRSNGYEG EEEWGGAGGG EWGGAEGGGA WGGGGGGGGA  60
   61 WGGEGEGGGE WGGGGEGGGG GRRGWFMMRE SRQVIKSEGG EMRVVLSPRG RIIEKPMHIG 120
  121 FLTMEPKTLF VPQYLDSSLL IFIRQGEATL GVICKDEFGE RKLKAGDIYW IPAGSVFYLH 180
  181 NTGLGQRLHV ICSIDPTQSL GFETFQPFYI GGGPSSVLAG FDPHTLTSAF NVSLPELQQM 240
  241 MMSQFRGPIV YVTEGPQPQP QSTVWTQFLG LRGEEKHKQL KKLLETKQGS PQDQQYSSGW 300
  301 SWRNIVRSIL DLTEEKNKGS GSSECEDSYN IYDKKDKPSF DNKYGWSIAL DYDDYKPLKH 360
  361 SGIGVYLVNL TAGAMMAPHM NPTATEYGIV LAGSGEIQVV FPNGTSAMNT RVSVGDVFWI 420
  421 PRYFAFCQIA SRTGPFEFVG FTTSAHKNRP QFLVGSNSLL RTLNLTSLSI AFGVDEETMR 480
  481 RFIEAQREAV ILPTPAAAPP HVGEMVSDRF V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle