YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DAPB1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNGLMASS SVFLHRPRIA FASRTNQTVG KYGKGRVSFM GIGTRRLPVV LSMTAMADSG  60
   61 EEAVKSVLPG NGISIMVNGC SGKMGKAVIK AADSAGVNIV PISFGSAGED GQRVEVCGKE 120
  121 ITVHGPTERE KVLSSVFEKH PELIVVDYTI PSAVNDNAEL YSKVGVPFVM GTTGGDRNKL 180
  181 YETVEEAKIY AVISPQMGKQ VVAFLAAMEI MAEQFPGAFS GYSLDVMESH QASKLDASGT 240
  241 AKAVISCFQE LGVSYDMDQI QLIRDPKQQV EMVGVPEEHI SGHAFHLYHL TSPDETVSFE 300
  301 FQHNVCGRSI YAEGTVDAVL FLAKKIRLKA DQRIYNMIDV LREGNMR

Type	Start	End	Confidence
Signal Peptide	1	22	0.89
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	347	0.99