YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5823570, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEDLVLDTA IRDWVLIPLS VVMVLIGILR YFVSKLMRST PTPDAKMVKE GQVVIRARNL  60
   61 KVGANFIPPK SFRARRFYFS NEENGLLHVP KGEAQNPQAA MFSDPNMAMD MMKKNLSMII 120
  121 PQTLTFAWVN FFFSGFVAAK IPFPLTQRFR SMLQNGIDLS TVDVSYVSSR SWYFLNLFGL 180
  181 RGLFSLILGD ENAIDDTQRM MQMGGFGFDA SKSLGAEKDG LDIIQHEWAL PRFEQRAESV 240
  241 LRKLVK

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.85
Transmembrane Helix	14	33	0.94
Cytoplasmic	34	118	0.91
Transmembrane Helix	119	141	0.86
Non-Cytoplasmic	142	246	0.75