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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB12G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELESTSNGR RPPPPAEIGR GAYLAWEDLT VVIPNFSGGP TRRLLDGLNG HAEPGRIMAI  60
   61 MGPSGSGKST LLDSLAGRLA RNVIMTGNLL LNGKKARLDY GLVAYVTQED ILMGTLTVRE 120
  121 TITYSAHLRL SSDLTKEEVN DIVEGTIIEL GLQDCADRVI GNWHSRGVSG GERKRVSVAL 180
  181 EILTRPQILF LDEPTSGLDS ASAFFVIQAL RNIARDGGRT VVSSIHQPSS EVFALFDDLF 240
  241 LLSSGETVYF GESKFAVEFF AEAGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIRE 300
  301 TPATSDPLMN LATSEIKARL VENYRRSVYA KSAKSRIREL ASIEGHHGME VRKGSEATWF 360
  361 KQLRTLTKRS FVNMCRDIGY YWSRIVIYIV VSFCVGTIFY DVGHSYTSIL ARVSCGGFIT 420
  421 GFMTFMSIGG FPSFIEEMKV FYKERLSGYY GVSVYIISNY VSSFPFLVAI ALITGSITYN 480
  481 MVKFRPGVSH WAFFCLNIFF SVSVIESLMM VVASLVPNFL MGLITGAGII GIIMMTSGFF 540
  541 RLLPDLPKVF WRYPISFMSY GSWAIQGAYK NDFLGLEFDP MFAGEPKMTG EQVINKIFGV 600
  601 QVTHSKWWDL SAIVLILVCY RILFFIVLKL KERAEPALKA IQAKRTMKSL KKRPSFKKVP 660
  661 SLSSLSSRRH QPLHSLSSQE GLTSPIN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle