YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11358141, gi|...
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALGDLMVSR LSQSSVTVVT NHLYDDDDNC ASSAHDDSRV SIIASPRVAS SSYENLSAAT  60
   61 SMAYLPQTLV LCDLRHDDAS DIVQPPRWRL KERMKTGCVA LVMCLHITVD PPDVIKISPC 120
  121 ARLECWIDPF SMFPPRRALE AIGQNLSIQY ERWLARARYK VELDPTKDDV RKLCLSCRKY 180
  181 AKTERVLFHY NGHGVPKPTP NGEIWVYNKN FTQYIPLPVS ELDSWLKTPT IYVFDCSAAR 240
  241 VILNAFAEGE SSGPPKDCIL LAACDVHETL PQSVEFPADV FTSCLTTPIN IALKWFCRRS 300
  301 LLKEFIDESL IDRIPGRQND RKTLLGELNW IFTAVTDTIA WNVLPRELFQ RLFRQDLLVA 360
  361 SLFRNFLLAE RIMRDAWDMA AEICLSQLPQ FFLDPNTEFQ PSSFFTEQLT AFEVWLDHGS 420
  421 EHKKPPEQLP IVLQGAITGF ILPLPSNIYI YPTILAYLES DSYQVLLSQC HRYRALVLLG 480
  481 RFLDMGPWAV DLALSVGIYP CVVKLLQTTT IELRQILVFI WTKILALDKS CQVDLVKDRG 540
  541 HIYFIRFLDS SDAFPEQRAM AAFILAVIVD GYKRGQESCL EANLIAVCLG HLEATQLCDP 600
  601 PPEPLFLQWL CLCLGKLWED YLEAQIMGRE ANASENLIAG HTNLLQVRAA AVFALGTLLD 660
  661 VGFDSGKGVC DEEFDDDENI VEDIIIKSLL DVVSDGSPLV RTEVAVALAR FAFGHKQHLK 720
  721 SVADSYWKPQ NSLRTSLPSM AKFHDSGTSI VASSDMGSLT RASPDSQPVA REGRISSSLQ 780
  781 EPFSGLMQGS PLADDSSLHS DVGIIHDGVS NGVVHQPRPL DNAIYSQSVL AMFTLAKDPS 840
  841 PRIASLGRRV LSVIGIEQIV AKPSKSNGRP GEAASASHTP LAGLVRSSSW FDMHTGHLPL 900
  901 TFRTPPVSPP QTSYLTGLRR VCSLELRPHL LGSPDSGLAD PILGVSGSER SLLPQSTIYN 960
  961 WSCGHFSKPL LGGADANEEI AAQREEKKKF SLEHIAKCQH SSISGLSNIP IANWDTKFET1020
 1021 GTKTALLHPF SPIVVAADEN ERIRVWNYEE ATLLNGFDNN DFPDKGISNL CLVNELDDSL1080
 1081 LLVASCNVPT LSRASFAIRI WKDYATKGRQ KLVTGFSSIQ GQKPGASGLN AVVDWQQQSG1140
 1141 YLYVSGESLS IMVWDLDKEQ LVKSMPFESG CSVTALSASQ VHGSQLAAGF ADGSVRLYDV1200
 1201 RTPDLRNLTS PMYSLVCATR PHQRVEKVVG LSFQPGLDPA KIVSASQAGD IQFLDLRRPK1260
 1261 ETYLTIDAHR GSLTALGVHR HAPIIASGSA KQLIKVFSLK GEQLGIIKYH TSFMGQQIGP1320
 1321 VSCLAFHPYQ MLLAAGAAGS FVSLYTHHNT QLPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle