YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADS2_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVTSTVEEN HQKNPSTPAA VEEKKKRRWV FWDRRWRRLD YVKFSASFTV HSLALLAPFY  60
   61 FTWSALWVTF LFYTIGGLGI TVSYHRNLAH RSFKVPKWLE YLLAYCALLA IQGDPIDWVS 120
  121 THRYHHQFTD SERDPHSPKE GFWFSHLLWI YDSAYLVSKC GRRANVEDLK RQWFYRFLQK 180
  181 TVLFHILGLG FFLFYLGGMS FVTWGMGVGA ALEVHVTCLI NSLCHIWGTR TWKTNDTSRN 240
  241 VWWLSVFSFG ESWHNNHHAF ESSARQGLEW WQIDISWYIV RFFEIIGLAT DVKVPTEAQR 300
  301 RRMAIVR

Type	Start	End	Confidence
Cytoplasmic	1	40	0.96
Transmembrane Helix	41	61	0.90
Non-Cytoplasmic	62	65	0.73
Transmembrane Helix	66	88	0.86
Cytoplasmic	89	180	0.72
Transmembrane Helix	181	202	0.89
Non-Cytoplasmic	203	208	0.64
Transmembrane Helix	209	229	0.77
Cytoplasmic	230	307	0.59