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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11358271, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDQRWRLL RPAFFIFFFL FFLPHNLTFG LCFNTEALAL MKFKERIEID PFGALVNWGE  60
   61 LSHCSWSGVV CSHDGRVVIL NLRDLSLQGT LAPELGNLTH LKSLILRNNS FSGKVPEEVT 120
  121 ELQELEILDL CDNNFGQPFP FARRLLQISP PPSQPSPPSP MEEVPIDFPF FFAPPPQNIG 180
  181 ASPPTETQVI PNPSPVPPPP AQPPPAQTPP PQLSEVPHAV NKKKSHKSKM YIIVGVLVGV 240
  241 LGVMAALVAF FFLWNQKVKL IKPWGETGSS GQLQDVVTTG VPKLKLAELE TACEDFSNII 300
  301 GSTSSDATIY KGTLSTGSEI AVLAVASGSL QDWSEDHETQ FQEKRLSQVN HKNFLNVIGY 360
  361 CHEDEPFNRM LVFEYAPNGS LFEHLHDQDA EHLDWPMRLR IVMGIAYCME HMHNLNPKPI 420
  421 SHTNLNSSSV YLATDYAAKV SDFTFLSSTP LDPMTNVSSF GALLQEIITG KIPDPDSLLQ 480
  481 EETKPVADPT LKSFQEEVME RVWEVVKECL SQKVEMKEVV VKLREITGIT PEAALPSRSP 540
  541 AWWAELEIIS TEM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle