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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y3684_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVTVLPSVS GLSAVASSSN LRRLTSASNH RLTAIKSVTS TSSPPTPSSG VQRRRKNNDE  60
   61 NRATVAKVVE NPYSKVEAAR PDLQKRLSDF LEEAREFVGD GGGPPRWFSP LECGAQATNS 120
  121 PLLLYLPGID GTGLGLIRHH KKLGEIFDIW CLHIPVSDRT PVKDLVKLIE ETVKSENFRL 180
  181 PNRPIYLVGE SIGACLALDV AARNPNIDLS LILVNPATHV NNFMVQPLSG MLNVLPDGLP 240
  241 TLLEDIFDFG FKQGDPLTGM LDALSNEFSV QRMGGVGGGM LRDVLAVSAN LPTLSRMFPK 300
  301 DTLLWKLEML KYAIASVNSH IYSVRAETLI LLSGRDHWLL KEEDIDRYSR TLPKCIVRKL 360
  361 DDNGQFPLLE DGVDLATIIK CTCFYRRGKS HDHITDYIMP TTFELKQQVD DHRLLMDGTS 420
  421 PVMLSTLEDG TVVRSLEGLP SEGPVLYVGY HMILGFELAP MVIQLMTERN IHLRGLAHPM 480
  481 LFKNLQDSLV DTKMFDKYKI MGGVPVSHFN IYKLLREKAH VLLYPGGVRE ALHRKGEEYK 540
  541 LFWPERSEFV RVASKFGAKI VPFGVVGEDD ICEIVLDSND QRNIPILKDL MEKATKDAGN 600
  601 IREGDESELG NQECYFPGLV PKIPGRFYYY FGKPIETAGK EKELKDKEKA QELYLQVKSE 660
  661 VEQCIDYLKV KRESDPYRHL LPRMLYQASH GWSSEIPTFD L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle