YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15027853, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWSLCSTHG VSSSIALTYG FRHRRRSTFR IFATSDGLEP KDDPPESPLP SSSSALGKDL  60
   61 KKVVNKTAAT FAPRASTASK NPALPGTTLY KVFEVQGYAS MFLGGVLSFN LLFPSSEPDL 120
  121 WRLMGMWSIW MFTIPSLRAR DCPSKEKEAL NYLFLIVPLL NVAIPFFWKS FALVWSADTV 180
  181 AFFAMYAWKL GWLERTE

Type	Start	End	Confidence
Cytoplasmic	1	94	0.82
Transmembrane Helix	95	113	0.83
Non-Cytoplasmic	114	119	0.81
Transmembrane Helix	120	139	0.85
Cytoplasmic	140	148	0.89
Transmembrane Helix	149	168	0.90
Non-Cytoplasmic	169	173	0.69
Transmembrane Helix	174	192	0.85
Cytoplasmic	193	197	0.81