YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15222668, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPNWPSLL MVVLALYSMV AYTSAQYSPT PTPYSPLPPY VYNSPPPYVY NSPSPPPYVY  60
   61 KPPPYIYSSP PPPPYVYSSP PPPPYVYNSP PPPPYVYSSP PPPPYVYKSP PPPPYVYSSP 120
  121 PPPPYVYKSP PPPPYVYSSP PPPPYVYSSP PPPPYVYKSP PPPPYVYSPP PPPPYVYQSP 180
  181 PPPPYVYSSP PPPPYVYKSP PPPPYVYSSP PPPPYVYKSP PPPPYVYSSP PPPPYVYKSP 240
  241 PPPPYVYSSP PPPPYVYKSP PPPPYVYSSP PPPPYVYKSP PPPPYVYSSP PPPPYVYSSP 300
  301 PPPPYVYSSP PPPPYVYKSP PPPPYVYTSP PPPPYVYKSP PPPPYVDSYS PPPAPYVYKP 360
  361 PPYVYKPPPY VYNYSPPPAP YVYKPPPYVY SYSPPPAPYV YKPPPYVYSY SPPPAPYVYK 420
  421 PPPYVYSSPS PPPYYSSPSP PLY

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	443	0.99