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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12324203, gi|...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVKEETLKN LGDGVVLRPV DHCSSIWSMK MNMKNFLKKL HISPNQSDEA EGSISTTKSN  60
   61 HHKSIDVSSS SSPRSHHSNS PEIKPFSGLS NWLSSVGHRK IPSPPNSFNA KNRAATVDDT 120
  121 VVVNGSEHVD LGSKDPAVEE ENQIQLALEL SAREDPEATQ IEAIKQFSLG SCAPENSPAE 180
  181 LIAYRYWNYN CLGYDDKILD GFYDLYGVLN ASSAERIPPL LDLQGTPVSD GVTWEAVLVN 240
  241 RSGDSNLLRL EQMALDIAAK SRSVSSSGFV NSELVRKLAI LVGDYMGGPV VHPESMLRAW 300
  301 RSLSYSLKAT LGSMVLPLGS LTIGLARHRA LLFKVLCDSV GVPCRIVKGQ QYTGSEDVAM 360
  361 NFIKADDGRE YIVDLMGDPG TLIPADAAGL QIDYDESAYS ASPGDNDSIH VASSSNGIES 420
  421 SYEENTEFRT GEHRSSTKSS GERNQSGGGG DLIVHPNISR EDVKNQKKVE KAPFQNLSSR 480
  481 PIHSFTHMRS PSWTEGVSSP AAQRMKVKDV SQYMIDAAKE NPRLAQKLHD VLLESGVVAP 540
  541 PNLFSEVYPQ QLEATVESKN STEAKKERGK DLETTQEGRH QNGFGPVRFL PPLPRVQSKT 600
  601 NAHDQRDNGK VVSQSDSSHS EASSTEYART VPAAVAAAAV VASSMVAAAA AKSANSDSSP 660
  661 IELPAAAAAT ATAAAVVATA AAVSRQLELG SNSDGDDGSG GHEPQGSGDS NHGPNSGGER 720
  721 ISDKSIGNES SKSDCDDVSD CEILWEEITV GERIGLGSYG EVYRGDWHGT EVAVKKFLDQ 780
  781 DLTGEALEEF RSEVRIMKKL RHPNIVLFMG AVTRPPNLSI VTEFLPRGSL YRLIHRPNNQ 840
  841 LDERRRLRMA LDAARGMNYL HSCNPMIVHR DLKSPNLLVD KNWVVKVCDF GLSRMKHSTY 900
  901 LSSKSTAGTA EWMAPEVLRN EPADEKCDVY SYGVILWELF TLQQPWGKMN PMQVVGAVGF 960
  961 QHRRLDIPDF VDPAIADLIS KCWQTDSKLR PSFAEIMASL KRLQKPVTGS NIPRPVPSSS1020
 1021 SLPTEHEQKD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle